Postdoctoral researcher CHUV UNIL CVMR
Publications
My publications have been entered into the HAL publication system since 2017. Here is an automatically generated page from it.
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2024- Journal articles
Self‐gated free‐running 5D whole‐heart MRI using blind source separation for automated cardiac motion extraction
Isabel Montón Quesada, Augustin C. Ogier, Masaki Ishida, Masafumi Takafuji, Haruno Ito, Hajime Sakuma, Ludovica Romanin, Christopher Roy, Milan Prša, Jonas Richiardi, Jérôme Yerly, Matthias Stuber, Ruud van Heeswijk
Magnetic Resonance in Medicine, Wiley, 2024
DOI: 10.1002/mrm.30322
Beyond weakness: Exploring intramuscular fat and quadriceps atrophy in ACLR recovery
Mckenzie White, Augustin C. Ogier, Thomas Chenevert, Elizabeth Zucker, Luke Stoneback, Constance P. Michel, Riann Palmieri-Smith, Lindsey Lepley
Journal of Orthopaedic Research, Wiley, 2024
DOI: 10.1002/jor.25910
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- Conference communications
Fully Automated Motion-corrected 2D CINE MRI of the Fetal Heart
Robin Ferincz, Augustin C. Ogier, Ludovica Romanin, Leonor Alamo, Estelle Tenisch, Milan Prsa, Jerome Yerly, Mike Seed, Christopher Macgowan, Matthias Stuber, Christopher Roy
Society for Cardiovascular Magnetic Resonance (SCMR), Jan 2024, Londres, United Kingdom, pp.100198
Intramuscular Fat Infiltration Following ACL Reconstruction
Mckenzie White, Augustin C. Ogier, Thomas Chenevert, Elizabeth Zucker, Luke Stoneback, Constance P. Michel, Riann Palmieri-Smith, Lindsey Lepley
Orthopaedic Research Society, Feb 2024, Long beach, CA, United States
Free-breathing respiratory-navigator-gated 2D radial MR fingerprinting of the transplanted heart at 3T
Pauline Calarnou, Augustin C. Ogier, Tamila Abdurashidova, Jean Baptiste Ledoux, Jerome Yerly, Roger Hullin, Ruud B van Heeswijk
International Society for Magnetic Resonance in Medicine (ISMRM), May 2024, Singapour, Singapore
Free-running motion-resolved 5D whole-heart anatomical MRI at 3T without contrast agent
Augustin C. Ogier, Isabel Montón Quesada, Xavier Sieber, Pauline Calarnou, Jean-Baptiste Ledoux, Bastien Milani, Christopher W. Roy, Jerome Yerly, Matthias Stuber, Ruud B van Heeswijk
International Society for Magnetic Resonance in Medicine (ISMRM), May 2024, Singapour, Singapore
Convex Gradient Optimization for the Free Running Framework
Cyril Tous, Martin Nicoletti, Augustin C. Ogier, Christopher W. Roy, Jerome Yerly, Matthias Stuber
International Society for Magnetic Resonance in Medicine (ISMRM), May 2024, Singapour, Singapore
A Multi-Resolution Approach to Estimate Cardiac and Respiratory Motion Fields for 5D Whole-Heart MR Image Reconstruction – a Proof of Concept
Jerome Yerly, Augustin C. Ogier, Christopher W. Roy, Ruud B van Heeswijk, Matthias Stuber
International Society for Magnetic Resonance in Medicine (ISMRM), May 2024, Singapour, Singapore
First Application of a 3D Radial Trajectory for Free-Breathing ECG-Triggered Cardiac T1ρ Mapping at 1.5T
Jana H. Zhang, Aurelien Bustin, Augustin C. Ogier, Ruud B van Heeswijk, Christopher W. Roy, Isabel Montón Quesada, Matthias Stuber, Jerome Yerly
International Society for Magnetic Resonance in Medicine (ISMRM), May 2024, Singapour, Singapore
Navigator-gated 2D radial MR fingerprinting of the kidney at 3T
Pauline Calarnou, Augustin C. Ogier, Jean Baptiste Ledoux, Ibtisam Aslam, Jean-Pierre Vallee, Jerome Yerly, Ruud B van Heeswijk
International Society for Magnetic Resonance in Medicine (ISMRM), May 2024, Singapour, Singapore
2023- Journal articles
Quantification of muscle involvement in familial amyloid polyneuropathy using MRI
Clémence Durelle, Emilien Delmont, Constance Michel, Amira Trabelsi, Marc‐adrien Hostin, Augustin Ogier, David Bendahan, Shahram Attarian
European Journal of Neurology, Wiley, 2023, 30, pp.3286-3295
DOI: 10.1111/ene.15970
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Four-dimensional reconstruction and characterization of bladder deformations
Augustin C. Ogier, Stanislas Rapacchi, Marc‐Emmanuel Bellemare
Computer Methods and Programs in Biomedicine, Elsevier, 2023, 237, pp.107569
DOI: 10.1016/j.cmpb.2023.107569
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Effect of knee joint angle on vastus medialis and vastus lateralis rigidity during isometric submaximal voluntary knee extensions
Jérémie Bouvier, Augustin C. Ogier, Cyril Martin, Alexandre Fouré
Journal of Electromyography and Kinesiology, Elsevier, 2023, pp.102826
DOI: 10.1016/j.jelekin.2023.102826
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The Impact of Fatty Infiltration on MRI Segmentation of Lower Limb Muscles in Neuromuscular Diseases: A Comparative Study of Deep Learning Approaches
Marc‐adrien Hostin, Augustin C. Ogier, Constance P. Michel, Yann Le Fur, Maxime Guye, Shahram Attarian, Etienne Fortanier, Marc‐Emmanuel Bellemare, David Bendahan
Journal of Magnetic Resonance Imaging, Wiley-Blackwell, 2023
DOI: 10.1002/jmri.28708
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- Conference communications
Free-running self-gated motion-resolved 5D whole-heart anatomical MRI at 3T without contrast agent
Augustin C. Ogier, Isabel Montón Quesada, Xavier Sieber, Pauline Calarnou, Jean-Baptiste Ledoux, Bastien Milani, Christopher W. Roy, Jerome Yerly, Matthias Stuber, Ruud B van Heeswijk
Society for Magnetic Resonance Angiography (SMRA), Oct 2023, Sendai, Japan
The navigator acceptance window width does not affect accuracy and precision in free-breathing 2D radial cardiac MR fingerprinting of the myocardium at 3T
Pauline Calarnou, Augustin C. Ogier, Roger Hullin, Philippe Meyer, Jonas Richiardi, Jerome Yerly, Ruud B van Heeswijk
International Society for Magnetic Resonance in Medicine (ISMRM), Jun 2023, Toronto, Canada
Effect of knee angle and submaximal voluntary contraction intensity on vastus medialis and vastus lateralis rigidity
Jérémie Bouvier, Augustin C. Ogier, Cyril Martin, Alexandre Fouré
28th annual Congress of the European College of Sport Science (ECSS), Jul 2023, Paris, France
Blind Source Separation Improves the Precision and Robustness of Self-Gated Motion Extraction in Free-Running 4D Whole-Heart MRI
Isabel Montón Quesada, Augustin C. Ogier, Jerome Yerly, Jonas Richiardi, Christopher W. Roy, Juerg Schwitter, Matthias Stuber, Ruud B van Heeswijk
International Society for Magnetic Resonance in Medicine (ISMRM), Jun 2023, Toronto, Canada
- Conference papers
Deep Spatio-Temporal Multiplex Graph Learning for Cardiac Imaging Classification
Jaume Banus, Augustin C. Ogier, Roger Hullin, Philippe Meyer, Ruud van Heeswijk, Jonas Richiardi
IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP), IEEE, 2023, pp.1-5
DOI: 10.1109/ICASSP49357.2023.10096712
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2022- Journal articles
The Road Toward Reproducibility of Parametric Mapping of the Heart: A Technical Review
Augustin C. Ogier, Aurelien Bustin, Hubert Cochet, Juerg Schwitter, Ruud van Heeswijk
Frontiers in Cardiovascular Medicine, Frontiers Media, 2022, 9
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Characterization of surface motion patterns in highly deformable soft tissue organs from dynamic MRI: An application to assess 4D bladder motion
Karim Makki, Amine Bohi, Augustin C. Ogier, Marc Emmanuel Bellemare
Computer Methods and Programs in Biomedicine, Elsevier, 2022, 218, pp.106708
DOI: 10.1016/j.cmpb.2022.106708
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Whole-muscle fat analysis identifies distal muscle end as disease initiation site in facioscapulohumeral muscular dystrophy
Linda Heskamp, Augustin C. Ogier, Bendahan David, Arend Heerschap
Communications Medicine, Nature, 2022, 2, pp.155
DOI: 10.1038/s43856-022-00217-1
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- Conference communications
Three-dimensional reconstruction and characterization of bladder deformations
Augustin C. Ogier, Stanislas Rapacchi, Marc‐Emmanuel Bellemare
International Society for Magnetic Resonance in Medicine (ISMRM), May 2022, London, United Kingdom
Geometric and clinical evaluation of deep learning-based segmentation of individual lower limb muscles from patients with neuropathies
Marc-Adrien Hostin, Augustin C. Ogier, Constance P. Michel, Yann Le Fur, Maxime Guye, Shahram Attarian, Marc-Emmanuel Bellemare, David Bendahan
International Society for Magnetic Resonance in Medicine (ISMRM), May 2022, London, United Kingdom
2021- Journal articles
Overview of MR Image Segmentation Strategies in Neuromuscular Disorders
Augustin C. Ogier, Marc-Adrien Hostin, Marc-Emmanuel Bellemare, David Bendahan
Frontiers in Neurology, Frontiers Media, 2021, 12, pp.625308
DOI: 10.3389/fneur.2021.625308
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Impaired aerobic capacity and premature fatigue preceding muscle weakness in the skeletal muscle Tfam KO mouse model
Benjamin Chatel, Sylvie Ducreux, Zeina Harhous, Nadia Bendridi, I. Varlet, Augustin C. Ogier, Monique Bernard, Julien Gondin, Jennifer Rieusset, Håkan Westerblad, David Bendahan, Charlotte Gineste
Disease Models & Mechanisms, Cambridge Company of Biologists, 2021, 14
DOI: 10.1242/dmm.048981
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Assessment of in vivo bone microarchitecture changes in an anti-TNFα treated psoriatic arthritic patient
Enrico Soldati, Lucas Escoffier, Sophie Gabriel, Augustin C. Ogier, Christophe Chagnaud, Jean Mattei, Serge Cammilleri, David Bendahan, Sandrine Guis
PLoS ONE, Public Library of Science, 2021, 16, pp.e0251788
DOI: 10.1371/journal.pone.0251788
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- Conference communications
Fonction de perte basée sur les contours pour la segmentation d’IRM de vessie par apprentissage profond
Marc-Adrien Hostin, Augustin C. Ogier, Marc-Emmanuel Bellemare
5ème congrès scientifique de la Société Francaise de Résonance Magnétique en Biologie et Médecine (SFRMBM), Sep 2021, Lyon, France
Reconstruction et caractérisation 3D des déformations de la vessie
Augustin C. Ogier, Stanislas Rapacchi, Marc-Emmanuel Bellemare
5ème Congrès de la Société Française de Résonance Magnétique en Biologie et Médecine (SFRMBM), Sep 2021, Lyon, France
- Conference papers
Combining loss functions for deep learning bladder segmentation on dynamic MRI
Marc-Adrien Hostin, Augustin C. Ogier, Nicolas Pirró, Marc-Emmanuel Bellemare
IEEE EMBS International Conference on Biomedical and Health Informatics (BHI), 2021, pp.1-4
DOI: 10.1109/BHI50953.2021.9508559
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A new geodesic-based feature for characterization of 3D shapes: application to soft tissue organ temporal deformations
Karim Makki, Amine Bohi, Augustin C. Ogier, Marc-Emmanuel Bellemare
25th International Conference on Pattern Recognition : ICPR2020, 2021
DOI: 10.1109/ICPR48806.2021.9412922
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2020- Journal articles
Supervised segmentation framework for evaluation of diffusion tensor imaging indices in skeletal muscle
Laura Secondulfo, Augustin C. Ogier, Jithsa Monte, Vincent Aengevaeren, David Bendahan, Aart Nederveen, Gustav Strijkers, Melissa Hooijmans
NMR in Biomedicine, Wiley, 2020
DOI: 10.1002/nbm.4406
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Deep learning‐based fully automatic segmentation of wrist cartilage in MR images
Ekaterina Brui, Aleksandr Efimtcev, Vladimir Fokin, Remi Fernandez, Anatoliy Levchuk, Augustin C. Ogier, Alexey Samsonov, Jean Mattei, Irina Melchakova, David Bendahan, Anna Andreychenko
NMR in Biomedicine, Wiley, 2020, 33
DOI: 10.1002/nbm.4320
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A Quantitative muscle MRI Study of Patients with Sporadic Inclusion Body Myositis
Behnaz Ansari, Emmanuelle Salort-Campana, Augustin C. Ogier, Arnaud Le Troter, Benjamin de Sainte Marie, Maxime Guye, Emilien Delmont, Aude-Marie Grapperon, Annie Verschueren, Bendahan David, Shahram Attarian
Muscle & nerve. Supplement., 2020, 61, pp.496-503
DOI: 10.1002/mus.26813
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Quantitative assessment of sciatic nerve changes in CMT1A patients using magnetic resonance neurography
Etienne Fortanier, Augustin C. Ogier, Emilien Delmont, Marie‐noëlle Lefebvre, Patrick Viout, Maxime Guye, David Bendahan, Shahram Attarian
European Journal of Neurology, Wiley, 2020, 27, pp.1382-1389
DOI: 10.1111/ene.14303
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Fat fraction distribution in lower limb muscles of patients with CMT1A
Joachim Bas, Augustin C. Ogier, Arnaud Le Troter, Emilien Delmont, Benjamin Leporq, Lauriane Pini, Maxime Guye, Amandine Parlanti, Marie-Noëlle Lefebvre, David Bendahan, Shahram Attarian
Neurology, American Academy of Neurology, 2020, 94, pp.e1480-e1487
DOI: 10.1212/WNL.0000000000009013
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- Conference communications
Muscular fat infiltration in FSHD starts with a “fat burst” near the distal tendon and advances towards the proximal tendon
Linda Heskamp, Augustin C. Ogier, David Bendahan, Arend Heerschap
International Society for Magnetic Resonance in Medicine (ISMRM), Aug 2020, Online, United States
Muscular fat infiltration in FSHD starts with a ‘‘fat burst’’ near the distal tendon and advances towards the proximal tendon
Linda Heskamp, Augustin C. Ogier, David Bendahan, Arend Heerschap
The 37th Annual Scientific Meeting of European Society for Magnetic Resonance in Medicine and Biology (ESMRMB), Sep 2020, Online, Austria
2019- Journal articles
Muscle alterations induced by electrostimulation are lower at short quadriceps femoris length
Alexandre Fouré, Augustin C. Ogier, Maxime Guye, Julien Gondin, David Bendahan
European Journal of Applied Physiology, Springer Verlag, 2019, 120, pp.325 - 335
DOI: 10.1007/s00421-019-04277-5
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A novel segmentation framework dedicated to the follow‐up of fat infiltration in individual muscles of patients with neuromuscular disorders
Augustin C. Ogier, Linda Heskamp, Constance P. Michel, Alexandre Fouré, Marc-Emmanuel Bellemare, Arnaud Troter, Arend Heerschap, David Bendahan
Magnetic Resonance in Medicine, Wiley, 2019, 83, pp.pp.1825-1836
DOI: 10.1002/mrm.28030
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Spatial difference can occur between activated and damaged muscle areas following electrically‐induced isometric contractions
Alexandre Fouré, Arnaud Le Troter, Augustin C. Ogier, Maxime Guye, Julien Gondin, David Bendahan
The Journal of Physiology, Wiley, 2019, 597, pp.4227-4236
DOI: 10.1113/JP278205
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Ultrahigh-Field Multimodal MRI Assessment of Muscle Damage
Alexandre Fouré, Lauriane Pini, Stanislas Rappacchi, Augustin C. Ogier, Jean-Camille Mattei, Mark Bydder, Maxime Guye, David Bendahan
Journal of Magnetic Resonance Imaging, Wiley-Blackwell, 2019, 49, pp.904-906
DOI: 10.1002/jmri.26222
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In vivo characterization of skeletal muscle function in nebulin‐deficient mice
Charlotte Gineste, Augustin C. Ogier, Isabelle Varlet, Zaynab Hourani, Monique Bernard, Henk Granzier, David Bendahan, Julien Gondin
Muscle & Nerve, Wiley, 2019, 61, pp.416 - 424
DOI: 10.1002/mus.26798
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- Patents
METHOD AND DEVICE FOR SEGMENTING IMAGES BY AUTOMATIC PROPAGATION INTO AN (N+1)-TH DIMENSION OF AN IMAGE SEGMENTATION INITIALIZED IN DIMENSION N
Arnaud Le Troter, David Bendahan, Augustin C. Ogier
Patent n°WO/2019/012220, 2019, France
- Conference communications
Suivi dynamique 3D des organes pelviens - résultats préliminaires
Augustin C. Ogier, Stanislas Rapacchi, Arnaud Le Troter, Marc-Emmanuel Bellemare
GRETSI, Aug 2019, Lille, France
Neurographie IRM quantitative de patients atteints d’une neuropathie de Charcot-Marie-Tooth de type 1A
Etienne Fortanier, Augustin C. Ogier, Marie-Noëlle Lefebvre, Émilien Delmont, David Bendahan, Shahram Attarian
17es Journées de la Société Française de Myologie (JSFM), Nov 2019, Marseille, France
Intramuscular Pattern of Fat Infiltration Measured by MRI to Identify Disease Initiation in FSHD
Linda Heskamp, Augustin C. Ogier, Arnaud Le Troter, David Bendahan, Arend Heerschap
MYO-MRI, Imaging in Neuromuscular Disease, Nov 2019, Berlin, Germany
Areas of muscle tissue alteration can differ from activated regions during electrically-induced isometric contractions
Alexandre Fouré, Arnaud Le Troter, Augustin C. Ogier, Maxime Guye, Julien Gondin, David Bendahan
MYO-MRI, Imaging in Neuromuscular Disease, Nov 2019, Montréal, Canada
Intramuscular pattern of fat infiltration measured by MRI to identify disease initiation in FSHD
Linda Heskamp, Augustin C. Ogier, Arnaud Le Troter, David Bendahan, Arend Heerschap
FSH Society International Research Congress, Jun 2019, Marseille, France
Fat fraction distribution in lower limb muscles of CMT1A patients: a quantitative MRI study
Joachim Bas, Augustin C. Ogier, Arnaud Le Troter, Émilien Delmont, Benjamin Leporq, Lauriane Pini, Maxime Guye, Amandine Parlanti, Marie-Noëlle Lefebvre, David Bendahan, Shahram Attarian
MYO-MRI, Imaging in Neuromuscular Disease, Nov 2019, Berlin, Germany
A single session of neuromuscular electrically evoked isometric contractions generates superficial activation of knee extensor muscles and localized alterations
Alexandre Fouré, Arnaud Le Troter, Augustin C. Ogier, Maxime Guye, Julien Gondin, Bendahan David
24th annual Congress of the European College of Sport Science (ECSS), Jul 2019, Prague, Czech Republic
- Conference papers
3D Dynamic MRI for Pelvis Observation - a First Step
Augustin C. Ogier, Stanislas Rapacchi, Arnaud Le Troter, Marc-Emmanuel Bellemare
IEEE 16th International Symposium on Biomedical Imaging (ISBI), 2019, pp.1801-1804
DOI: 10.1109/ISBI.2019.8759589
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2018- Journal articles
L-tyrosine supplementation does not ameliorate skeletal muscle dysfunction in zebrafish and mouse models of dominant skeletal muscle α-actin nemaline myopathy
Adriana Messineo, Charlotte Gineste, Tamar Sztal, Elyshia Mcnamara, Christophe A Vilmen, Augustin C. Ogier, Dorothee Hahne, David Bendahan, Nigel G. Laing, Robert Bryson-Richardson, Julien Gondin, Kristen J. Nowak
Scientific Reports, Nature Publishing Group, 2018, 8, pp.11490
DOI: 10.1038/s41598-018-29437-z
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Diffusion Properties and 3D Architecture of Human Lower Leg Muscles Assessed with Ultra-High-Field-Strength Diffusion-Tensor MR Imaging and Tractography: Reproducibility and Sensitivity to Sex Difference and Intramuscular Variability
Alexandre Fouré, Augustin C. Ogier, Arnaud Le Troter, Christophe Vilmen, Thorsten Feiweier, Maxime Guye, Julien Gondin, Pierre Besson, David Bendahan
Radiology, Radiological Society of North America, 2018, 287, pp.592-607
DOI: 10.1148/radiol.2017171330
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- Conference communications
Semi-automatic segmentation of individual muscles in MR images: A new tool dedicated to the follow-up of patients with neuromuscular disorders
Augustin C. Ogier, Linda Heskamp, Alexandre Fouré, Marc-Emmanuel Bellemare, Arnaud Le Troter, Arend Heerschap, David Bendahan
International Society for Magnetic Resonance in Medicine (ISMRM), Jun 2018, Paris, France
Intramuscular variability and sex difference in diffusion properties and 3D architecture of human lower leg muscles assessed with ultra-high-field diffusion tensor imaging and tractography
Alexandre Fouré, Augustin C. Ogier, Arnaud Le Troter, Christophe A Vilmen, Thorsten Feiweier, Maxime Guye, Julien Gondin, Pierre Besson, David Bendahan
International Society for Magnetic Resonance in Medicine (ISMRM), Jun 2018, Paris, France
Méthode de segmentation dédiée au suivi de l'infiltration en graisse des muscles individuels des patients atteints de maladies neuromusculaires
Augustin C. Ogier, Linda Heskamp, Alexandre Fouré, Arnaud Le Troter, Arend Heerschap, David Bendahan
16es Journées de la Société Française de Myologie (JSFM), Nov 2018, Brest, France
2017- Conference communications
3D MRI Segmentation of muscle through 2D multi-label propagation at 7T
Augustin C. Ogier, Alexandre Fouré, Michaël Sdika, Arnaud Le Troter, Bendahan David
34th Annual Scientific Meeting of the European Society of Magnetic Resonance in Medicine and Biology, Oct 2017, Barcelone, Spain
Caractérisation de la microarchitecture des muscles de la jambe par IRM à très haut champs magnétique (7T) : Etude de faisabilité et perspectives pour une évaluation précise et non invasive de l’architecture musculaire en 3D
Alexandre Fouré, Pierre Besson, Arnaud Le Troter, Augustin C. Ogier, Thorsten Feiweier, Christophe A Vilmen, Julien Gondin, Maxime Guye, David Bendahan
3ème Congrès de la Société Française de Résonance Magnétique en Biologie et Médecine (SFRMBM), Mar 2017, Bordeaux, France
3D architecture of human lower leg muscles assessed with ultra-high-field diffusion tensor imaging and tractography: sensitivity to sex difference and intramuscular variability
Alexandre Fouré, Augustin C. Ogier, Arnaud Le Troter, Thorsten Feiweier, Christophe A Vilmen, Maxime Guye, Julien Gondin, Pierre Besson, David Bendahan
MYO-MRI, Imaging in Neuromuscular Disease, Nov 2017, Berlin, Germany
Caractérisation de la microarchitecture des muscles de la jambe par IRM à très haut champ (7T) : Etude de faisabilité pour une évaluation précise et non-invasive de l’architecture musculaire en 3D
Alexandre Fouré, Pierre Besson, Arnaud Le Troter, Augustin C. Ogier, Thorsten Feiweier, Christophe Vilmen, Maxime Guye, Julien Gondin, Bendahan David
3e congrès de la Société Française de Résonance Magnétique Biologique et Médicale, Mar 2017, Bordeaux, France
Segmentation des muscles individuels en IRM basée sur des approches de recalage non-linéaire
Augustin C. Ogier, Michaël Sdika, Alexandre Fouré, Arnaud Le Troter, David Bendahan
3ème Congrès de la Société Française de Résonance Magnétique en Biologie et Médecine (SFRMBM), Mar 2017, Bordeaux, France
3D Architecture of Human Lower Leg Muscles assessed with Ultra High-Field Diffusion Tensor Imaging and Tractography: Sensitivity to Sex-Difference and Intramuscular Variability
Alexandre Fouré, Augustin C. Ogier, Arnaud Le Troter, Thorsten Feiweier, Christophe Vilmen, Maxime Guye, Julien Gondin, Pierre Besson, Bendahan David
Imaging in Neuromuscular Disease (Myo-MRI 2017), Nov 2017, Berlin, Germany
An accurate supervised segmentation of 3D individual lower leg muscles from 7T-MRI using label propagation
Augustin C. Ogier, Alexandre Fouré, Michaël Sdika, Arnaud Le Troter, David Bendahan
MYO-MRI, Imaging in Neuromuscular Disease, Nov 2017, Berlin, Germany
Segmentation d’images IRM à 7T des muscles individuels basée sur des approches de propagation de masques
Augustin C. Ogier, Alexandre Fouré, Michaël Sdika, Arnaud Le Troter, David Bendahan
15es Journées de la Société Française de Myologie (JSFM), Nov 2017, Colmar, France
- Conference papers
Individual muscle segmentation in MR images: A 3D propagation through 2D non-linear registration approaches
Augustin C. Ogier, Michael Sdika, Alexandre Fouré, Arnaud Le Troter, David Bendahan
39th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), IEEE, 2017, 2017, pp.317--320
DOI: 10.1109/EMBC.2017.8036826
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Self‐gated free‐running 5D whole‐heart MRI using blind source separation for automated cardiac motion extraction
Isabel Montón Quesada, Augustin C. Ogier, Masaki Ishida, Masafumi Takafuji, Haruno Ito, Hajime Sakuma, Ludovica Romanin, Christopher Roy, Milan Prša, Jonas Richiardi, Jérôme Yerly, Matthias Stuber, Ruud van Heeswijk
Magnetic Resonance in Medicine, Wiley, 2024
DOI: 10.1002/mrm.30322
Beyond weakness: Exploring intramuscular fat and quadriceps atrophy in ACLR recovery
Mckenzie White, Augustin C. Ogier, Thomas Chenevert, Elizabeth Zucker, Luke Stoneback, Constance P. Michel, Riann Palmieri-Smith, Lindsey Lepley
Journal of Orthopaedic Research, Wiley, 2024
DOI: 10.1002/jor.25910
Fully Automated Motion-corrected 2D CINE MRI of the Fetal Heart
Robin Ferincz, Augustin C. Ogier, Ludovica Romanin, Leonor Alamo, Estelle Tenisch, Milan Prsa, Jerome Yerly, Mike Seed, Christopher Macgowan, Matthias Stuber, Christopher Roy
Society for Cardiovascular Magnetic Resonance (SCMR), Jan 2024, Londres, United Kingdom, pp.100198
Intramuscular Fat Infiltration Following ACL Reconstruction
Mckenzie White, Augustin C. Ogier, Thomas Chenevert, Elizabeth Zucker, Luke Stoneback, Constance P. Michel, Riann Palmieri-Smith, Lindsey Lepley
Orthopaedic Research Society, Feb 2024, Long beach, CA, United States
Free-breathing respiratory-navigator-gated 2D radial MR fingerprinting of the transplanted heart at 3T
Pauline Calarnou, Augustin C. Ogier, Tamila Abdurashidova, Jean Baptiste Ledoux, Jerome Yerly, Roger Hullin, Ruud B van Heeswijk
International Society for Magnetic Resonance in Medicine (ISMRM), May 2024, Singapour, Singapore
Free-running motion-resolved 5D whole-heart anatomical MRI at 3T without contrast agent
Augustin C. Ogier, Isabel Montón Quesada, Xavier Sieber, Pauline Calarnou, Jean-Baptiste Ledoux, Bastien Milani, Christopher W. Roy, Jerome Yerly, Matthias Stuber, Ruud B van Heeswijk
International Society for Magnetic Resonance in Medicine (ISMRM), May 2024, Singapour, Singapore
Convex Gradient Optimization for the Free Running Framework
Cyril Tous, Martin Nicoletti, Augustin C. Ogier, Christopher W. Roy, Jerome Yerly, Matthias Stuber
International Society for Magnetic Resonance in Medicine (ISMRM), May 2024, Singapour, Singapore
A Multi-Resolution Approach to Estimate Cardiac and Respiratory Motion Fields for 5D Whole-Heart MR Image Reconstruction – a Proof of Concept
Jerome Yerly, Augustin C. Ogier, Christopher W. Roy, Ruud B van Heeswijk, Matthias Stuber
International Society for Magnetic Resonance in Medicine (ISMRM), May 2024, Singapour, Singapore
First Application of a 3D Radial Trajectory for Free-Breathing ECG-Triggered Cardiac T1ρ Mapping at 1.5T
Jana H. Zhang, Aurelien Bustin, Augustin C. Ogier, Ruud B van Heeswijk, Christopher W. Roy, Isabel Montón Quesada, Matthias Stuber, Jerome Yerly
International Society for Magnetic Resonance in Medicine (ISMRM), May 2024, Singapour, Singapore
Navigator-gated 2D radial MR fingerprinting of the kidney at 3T
Pauline Calarnou, Augustin C. Ogier, Jean Baptiste Ledoux, Ibtisam Aslam, Jean-Pierre Vallee, Jerome Yerly, Ruud B van Heeswijk
International Society for Magnetic Resonance in Medicine (ISMRM), May 2024, Singapour, Singapore
- Journal articles
Quantification of muscle involvement in familial amyloid polyneuropathy using MRI
Clémence Durelle, Emilien Delmont, Constance Michel, Amira Trabelsi, Marc‐adrien Hostin, Augustin Ogier, David Bendahan, Shahram Attarian
European Journal of Neurology, Wiley, 2023, 30, pp.3286-3295
DOI: 10.1111/ene.15970
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Four-dimensional reconstruction and characterization of bladder deformations
Augustin C. Ogier, Stanislas Rapacchi, Marc‐Emmanuel Bellemare
Computer Methods and Programs in Biomedicine, Elsevier, 2023, 237, pp.107569
DOI: 10.1016/j.cmpb.2023.107569
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Effect of knee joint angle on vastus medialis and vastus lateralis rigidity during isometric submaximal voluntary knee extensions
Jérémie Bouvier, Augustin C. Ogier, Cyril Martin, Alexandre Fouré
Journal of Electromyography and Kinesiology, Elsevier, 2023, pp.102826
DOI: 10.1016/j.jelekin.2023.102826
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The Impact of Fatty Infiltration on MRI Segmentation of Lower Limb Muscles in Neuromuscular Diseases: A Comparative Study of Deep Learning Approaches
Marc‐adrien Hostin, Augustin C. Ogier, Constance P. Michel, Yann Le Fur, Maxime Guye, Shahram Attarian, Etienne Fortanier, Marc‐Emmanuel Bellemare, David Bendahan
Journal of Magnetic Resonance Imaging, Wiley-Blackwell, 2023
DOI: 10.1002/jmri.28708
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- Conference communications
Free-running self-gated motion-resolved 5D whole-heart anatomical MRI at 3T without contrast agent
Augustin C. Ogier, Isabel Montón Quesada, Xavier Sieber, Pauline Calarnou, Jean-Baptiste Ledoux, Bastien Milani, Christopher W. Roy, Jerome Yerly, Matthias Stuber, Ruud B van Heeswijk
Society for Magnetic Resonance Angiography (SMRA), Oct 2023, Sendai, Japan
The navigator acceptance window width does not affect accuracy and precision in free-breathing 2D radial cardiac MR fingerprinting of the myocardium at 3T
Pauline Calarnou, Augustin C. Ogier, Roger Hullin, Philippe Meyer, Jonas Richiardi, Jerome Yerly, Ruud B van Heeswijk
International Society for Magnetic Resonance in Medicine (ISMRM), Jun 2023, Toronto, Canada
Effect of knee angle and submaximal voluntary contraction intensity on vastus medialis and vastus lateralis rigidity
Jérémie Bouvier, Augustin C. Ogier, Cyril Martin, Alexandre Fouré
28th annual Congress of the European College of Sport Science (ECSS), Jul 2023, Paris, France
Blind Source Separation Improves the Precision and Robustness of Self-Gated Motion Extraction in Free-Running 4D Whole-Heart MRI
Isabel Montón Quesada, Augustin C. Ogier, Jerome Yerly, Jonas Richiardi, Christopher W. Roy, Juerg Schwitter, Matthias Stuber, Ruud B van Heeswijk
International Society for Magnetic Resonance in Medicine (ISMRM), Jun 2023, Toronto, Canada
- Conference papers
Deep Spatio-Temporal Multiplex Graph Learning for Cardiac Imaging Classification
Jaume Banus, Augustin C. Ogier, Roger Hullin, Philippe Meyer, Ruud van Heeswijk, Jonas Richiardi
IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP), IEEE, 2023, pp.1-5
DOI: 10.1109/ICASSP49357.2023.10096712
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2022- Journal articles
The Road Toward Reproducibility of Parametric Mapping of the Heart: A Technical Review
Augustin C. Ogier, Aurelien Bustin, Hubert Cochet, Juerg Schwitter, Ruud van Heeswijk
Frontiers in Cardiovascular Medicine, Frontiers Media, 2022, 9
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Characterization of surface motion patterns in highly deformable soft tissue organs from dynamic MRI: An application to assess 4D bladder motion
Karim Makki, Amine Bohi, Augustin C. Ogier, Marc Emmanuel Bellemare
Computer Methods and Programs in Biomedicine, Elsevier, 2022, 218, pp.106708
DOI: 10.1016/j.cmpb.2022.106708
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Whole-muscle fat analysis identifies distal muscle end as disease initiation site in facioscapulohumeral muscular dystrophy
Linda Heskamp, Augustin C. Ogier, Bendahan David, Arend Heerschap
Communications Medicine, Nature, 2022, 2, pp.155
DOI: 10.1038/s43856-022-00217-1
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- Conference communications
Three-dimensional reconstruction and characterization of bladder deformations
Augustin C. Ogier, Stanislas Rapacchi, Marc‐Emmanuel Bellemare
International Society for Magnetic Resonance in Medicine (ISMRM), May 2022, London, United Kingdom
Geometric and clinical evaluation of deep learning-based segmentation of individual lower limb muscles from patients with neuropathies
Marc-Adrien Hostin, Augustin C. Ogier, Constance P. Michel, Yann Le Fur, Maxime Guye, Shahram Attarian, Marc-Emmanuel Bellemare, David Bendahan
International Society for Magnetic Resonance in Medicine (ISMRM), May 2022, London, United Kingdom
2021- Journal articles
Overview of MR Image Segmentation Strategies in Neuromuscular Disorders
Augustin C. Ogier, Marc-Adrien Hostin, Marc-Emmanuel Bellemare, David Bendahan
Frontiers in Neurology, Frontiers Media, 2021, 12, pp.625308
DOI: 10.3389/fneur.2021.625308
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Impaired aerobic capacity and premature fatigue preceding muscle weakness in the skeletal muscle Tfam KO mouse model
Benjamin Chatel, Sylvie Ducreux, Zeina Harhous, Nadia Bendridi, I. Varlet, Augustin C. Ogier, Monique Bernard, Julien Gondin, Jennifer Rieusset, Håkan Westerblad, David Bendahan, Charlotte Gineste
Disease Models & Mechanisms, Cambridge Company of Biologists, 2021, 14
DOI: 10.1242/dmm.048981
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Assessment of in vivo bone microarchitecture changes in an anti-TNFα treated psoriatic arthritic patient
Enrico Soldati, Lucas Escoffier, Sophie Gabriel, Augustin C. Ogier, Christophe Chagnaud, Jean Mattei, Serge Cammilleri, David Bendahan, Sandrine Guis
PLoS ONE, Public Library of Science, 2021, 16, pp.e0251788
DOI: 10.1371/journal.pone.0251788
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- Conference communications
Fonction de perte basée sur les contours pour la segmentation d’IRM de vessie par apprentissage profond
Marc-Adrien Hostin, Augustin C. Ogier, Marc-Emmanuel Bellemare
5ème congrès scientifique de la Société Francaise de Résonance Magnétique en Biologie et Médecine (SFRMBM), Sep 2021, Lyon, France
Reconstruction et caractérisation 3D des déformations de la vessie
Augustin C. Ogier, Stanislas Rapacchi, Marc-Emmanuel Bellemare
5ème Congrès de la Société Française de Résonance Magnétique en Biologie et Médecine (SFRMBM), Sep 2021, Lyon, France
- Conference papers
Combining loss functions for deep learning bladder segmentation on dynamic MRI
Marc-Adrien Hostin, Augustin C. Ogier, Nicolas Pirró, Marc-Emmanuel Bellemare
IEEE EMBS International Conference on Biomedical and Health Informatics (BHI), 2021, pp.1-4
DOI: 10.1109/BHI50953.2021.9508559
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A new geodesic-based feature for characterization of 3D shapes: application to soft tissue organ temporal deformations
Karim Makki, Amine Bohi, Augustin C. Ogier, Marc-Emmanuel Bellemare
25th International Conference on Pattern Recognition : ICPR2020, 2021
DOI: 10.1109/ICPR48806.2021.9412922
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2020- Journal articles
Supervised segmentation framework for evaluation of diffusion tensor imaging indices in skeletal muscle
Laura Secondulfo, Augustin C. Ogier, Jithsa Monte, Vincent Aengevaeren, David Bendahan, Aart Nederveen, Gustav Strijkers, Melissa Hooijmans
NMR in Biomedicine, Wiley, 2020
DOI: 10.1002/nbm.4406
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Deep learning‐based fully automatic segmentation of wrist cartilage in MR images
Ekaterina Brui, Aleksandr Efimtcev, Vladimir Fokin, Remi Fernandez, Anatoliy Levchuk, Augustin C. Ogier, Alexey Samsonov, Jean Mattei, Irina Melchakova, David Bendahan, Anna Andreychenko
NMR in Biomedicine, Wiley, 2020, 33
DOI: 10.1002/nbm.4320
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A Quantitative muscle MRI Study of Patients with Sporadic Inclusion Body Myositis
Behnaz Ansari, Emmanuelle Salort-Campana, Augustin C. Ogier, Arnaud Le Troter, Benjamin de Sainte Marie, Maxime Guye, Emilien Delmont, Aude-Marie Grapperon, Annie Verschueren, Bendahan David, Shahram Attarian
Muscle & nerve. Supplement., 2020, 61, pp.496-503
DOI: 10.1002/mus.26813
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Quantitative assessment of sciatic nerve changes in CMT1A patients using magnetic resonance neurography
Etienne Fortanier, Augustin C. Ogier, Emilien Delmont, Marie‐noëlle Lefebvre, Patrick Viout, Maxime Guye, David Bendahan, Shahram Attarian
European Journal of Neurology, Wiley, 2020, 27, pp.1382-1389
DOI: 10.1111/ene.14303
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Fat fraction distribution in lower limb muscles of patients with CMT1A
Joachim Bas, Augustin C. Ogier, Arnaud Le Troter, Emilien Delmont, Benjamin Leporq, Lauriane Pini, Maxime Guye, Amandine Parlanti, Marie-Noëlle Lefebvre, David Bendahan, Shahram Attarian
Neurology, American Academy of Neurology, 2020, 94, pp.e1480-e1487
DOI: 10.1212/WNL.0000000000009013
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- Conference communications
Muscular fat infiltration in FSHD starts with a “fat burst” near the distal tendon and advances towards the proximal tendon
Linda Heskamp, Augustin C. Ogier, David Bendahan, Arend Heerschap
International Society for Magnetic Resonance in Medicine (ISMRM), Aug 2020, Online, United States
Muscular fat infiltration in FSHD starts with a ‘‘fat burst’’ near the distal tendon and advances towards the proximal tendon
Linda Heskamp, Augustin C. Ogier, David Bendahan, Arend Heerschap
The 37th Annual Scientific Meeting of European Society for Magnetic Resonance in Medicine and Biology (ESMRMB), Sep 2020, Online, Austria
2019- Journal articles
Muscle alterations induced by electrostimulation are lower at short quadriceps femoris length
Alexandre Fouré, Augustin C. Ogier, Maxime Guye, Julien Gondin, David Bendahan
European Journal of Applied Physiology, Springer Verlag, 2019, 120, pp.325 - 335
DOI: 10.1007/s00421-019-04277-5
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A novel segmentation framework dedicated to the follow‐up of fat infiltration in individual muscles of patients with neuromuscular disorders
Augustin C. Ogier, Linda Heskamp, Constance P. Michel, Alexandre Fouré, Marc-Emmanuel Bellemare, Arnaud Troter, Arend Heerschap, David Bendahan
Magnetic Resonance in Medicine, Wiley, 2019, 83, pp.pp.1825-1836
DOI: 10.1002/mrm.28030
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Spatial difference can occur between activated and damaged muscle areas following electrically‐induced isometric contractions
Alexandre Fouré, Arnaud Le Troter, Augustin C. Ogier, Maxime Guye, Julien Gondin, David Bendahan
The Journal of Physiology, Wiley, 2019, 597, pp.4227-4236
DOI: 10.1113/JP278205
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Ultrahigh-Field Multimodal MRI Assessment of Muscle Damage
Alexandre Fouré, Lauriane Pini, Stanislas Rappacchi, Augustin C. Ogier, Jean-Camille Mattei, Mark Bydder, Maxime Guye, David Bendahan
Journal of Magnetic Resonance Imaging, Wiley-Blackwell, 2019, 49, pp.904-906
DOI: 10.1002/jmri.26222
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In vivo characterization of skeletal muscle function in nebulin‐deficient mice
Charlotte Gineste, Augustin C. Ogier, Isabelle Varlet, Zaynab Hourani, Monique Bernard, Henk Granzier, David Bendahan, Julien Gondin
Muscle & Nerve, Wiley, 2019, 61, pp.416 - 424
DOI: 10.1002/mus.26798
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- Patents
METHOD AND DEVICE FOR SEGMENTING IMAGES BY AUTOMATIC PROPAGATION INTO AN (N+1)-TH DIMENSION OF AN IMAGE SEGMENTATION INITIALIZED IN DIMENSION N
Arnaud Le Troter, David Bendahan, Augustin C. Ogier
Patent n°WO/2019/012220, 2019, France
- Conference communications
Suivi dynamique 3D des organes pelviens - résultats préliminaires
Augustin C. Ogier, Stanislas Rapacchi, Arnaud Le Troter, Marc-Emmanuel Bellemare
GRETSI, Aug 2019, Lille, France
Neurographie IRM quantitative de patients atteints d’une neuropathie de Charcot-Marie-Tooth de type 1A
Etienne Fortanier, Augustin C. Ogier, Marie-Noëlle Lefebvre, Émilien Delmont, David Bendahan, Shahram Attarian
17es Journées de la Société Française de Myologie (JSFM), Nov 2019, Marseille, France
Intramuscular Pattern of Fat Infiltration Measured by MRI to Identify Disease Initiation in FSHD
Linda Heskamp, Augustin C. Ogier, Arnaud Le Troter, David Bendahan, Arend Heerschap
MYO-MRI, Imaging in Neuromuscular Disease, Nov 2019, Berlin, Germany
Areas of muscle tissue alteration can differ from activated regions during electrically-induced isometric contractions
Alexandre Fouré, Arnaud Le Troter, Augustin C. Ogier, Maxime Guye, Julien Gondin, David Bendahan
MYO-MRI, Imaging in Neuromuscular Disease, Nov 2019, Montréal, Canada
Intramuscular pattern of fat infiltration measured by MRI to identify disease initiation in FSHD
Linda Heskamp, Augustin C. Ogier, Arnaud Le Troter, David Bendahan, Arend Heerschap
FSH Society International Research Congress, Jun 2019, Marseille, France
Fat fraction distribution in lower limb muscles of CMT1A patients: a quantitative MRI study
Joachim Bas, Augustin C. Ogier, Arnaud Le Troter, Émilien Delmont, Benjamin Leporq, Lauriane Pini, Maxime Guye, Amandine Parlanti, Marie-Noëlle Lefebvre, David Bendahan, Shahram Attarian
MYO-MRI, Imaging in Neuromuscular Disease, Nov 2019, Berlin, Germany
A single session of neuromuscular electrically evoked isometric contractions generates superficial activation of knee extensor muscles and localized alterations
Alexandre Fouré, Arnaud Le Troter, Augustin C. Ogier, Maxime Guye, Julien Gondin, Bendahan David
24th annual Congress of the European College of Sport Science (ECSS), Jul 2019, Prague, Czech Republic
- Conference papers
3D Dynamic MRI for Pelvis Observation - a First Step
Augustin C. Ogier, Stanislas Rapacchi, Arnaud Le Troter, Marc-Emmanuel Bellemare
IEEE 16th International Symposium on Biomedical Imaging (ISBI), 2019, pp.1801-1804
DOI: 10.1109/ISBI.2019.8759589
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2018- Journal articles
L-tyrosine supplementation does not ameliorate skeletal muscle dysfunction in zebrafish and mouse models of dominant skeletal muscle α-actin nemaline myopathy
Adriana Messineo, Charlotte Gineste, Tamar Sztal, Elyshia Mcnamara, Christophe A Vilmen, Augustin C. Ogier, Dorothee Hahne, David Bendahan, Nigel G. Laing, Robert Bryson-Richardson, Julien Gondin, Kristen J. Nowak
Scientific Reports, Nature Publishing Group, 2018, 8, pp.11490
DOI: 10.1038/s41598-018-29437-z
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Diffusion Properties and 3D Architecture of Human Lower Leg Muscles Assessed with Ultra-High-Field-Strength Diffusion-Tensor MR Imaging and Tractography: Reproducibility and Sensitivity to Sex Difference and Intramuscular Variability
Alexandre Fouré, Augustin C. Ogier, Arnaud Le Troter, Christophe Vilmen, Thorsten Feiweier, Maxime Guye, Julien Gondin, Pierre Besson, David Bendahan
Radiology, Radiological Society of North America, 2018, 287, pp.592-607
DOI: 10.1148/radiol.2017171330
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- Conference communications
Semi-automatic segmentation of individual muscles in MR images: A new tool dedicated to the follow-up of patients with neuromuscular disorders
Augustin C. Ogier, Linda Heskamp, Alexandre Fouré, Marc-Emmanuel Bellemare, Arnaud Le Troter, Arend Heerschap, David Bendahan
International Society for Magnetic Resonance in Medicine (ISMRM), Jun 2018, Paris, France
Intramuscular variability and sex difference in diffusion properties and 3D architecture of human lower leg muscles assessed with ultra-high-field diffusion tensor imaging and tractography
Alexandre Fouré, Augustin C. Ogier, Arnaud Le Troter, Christophe A Vilmen, Thorsten Feiweier, Maxime Guye, Julien Gondin, Pierre Besson, David Bendahan
International Society for Magnetic Resonance in Medicine (ISMRM), Jun 2018, Paris, France
Méthode de segmentation dédiée au suivi de l'infiltration en graisse des muscles individuels des patients atteints de maladies neuromusculaires
Augustin C. Ogier, Linda Heskamp, Alexandre Fouré, Arnaud Le Troter, Arend Heerschap, David Bendahan
16es Journées de la Société Française de Myologie (JSFM), Nov 2018, Brest, France
2017- Conference communications
3D MRI Segmentation of muscle through 2D multi-label propagation at 7T
Augustin C. Ogier, Alexandre Fouré, Michaël Sdika, Arnaud Le Troter, Bendahan David
34th Annual Scientific Meeting of the European Society of Magnetic Resonance in Medicine and Biology, Oct 2017, Barcelone, Spain
Caractérisation de la microarchitecture des muscles de la jambe par IRM à très haut champs magnétique (7T) : Etude de faisabilité et perspectives pour une évaluation précise et non invasive de l’architecture musculaire en 3D
Alexandre Fouré, Pierre Besson, Arnaud Le Troter, Augustin C. Ogier, Thorsten Feiweier, Christophe A Vilmen, Julien Gondin, Maxime Guye, David Bendahan
3ème Congrès de la Société Française de Résonance Magnétique en Biologie et Médecine (SFRMBM), Mar 2017, Bordeaux, France
3D architecture of human lower leg muscles assessed with ultra-high-field diffusion tensor imaging and tractography: sensitivity to sex difference and intramuscular variability
Alexandre Fouré, Augustin C. Ogier, Arnaud Le Troter, Thorsten Feiweier, Christophe A Vilmen, Maxime Guye, Julien Gondin, Pierre Besson, David Bendahan
MYO-MRI, Imaging in Neuromuscular Disease, Nov 2017, Berlin, Germany
Caractérisation de la microarchitecture des muscles de la jambe par IRM à très haut champ (7T) : Etude de faisabilité pour une évaluation précise et non-invasive de l’architecture musculaire en 3D
Alexandre Fouré, Pierre Besson, Arnaud Le Troter, Augustin C. Ogier, Thorsten Feiweier, Christophe Vilmen, Maxime Guye, Julien Gondin, Bendahan David
3e congrès de la Société Française de Résonance Magnétique Biologique et Médicale, Mar 2017, Bordeaux, France
Segmentation des muscles individuels en IRM basée sur des approches de recalage non-linéaire
Augustin C. Ogier, Michaël Sdika, Alexandre Fouré, Arnaud Le Troter, David Bendahan
3ème Congrès de la Société Française de Résonance Magnétique en Biologie et Médecine (SFRMBM), Mar 2017, Bordeaux, France
3D Architecture of Human Lower Leg Muscles assessed with Ultra High-Field Diffusion Tensor Imaging and Tractography: Sensitivity to Sex-Difference and Intramuscular Variability
Alexandre Fouré, Augustin C. Ogier, Arnaud Le Troter, Thorsten Feiweier, Christophe Vilmen, Maxime Guye, Julien Gondin, Pierre Besson, Bendahan David
Imaging in Neuromuscular Disease (Myo-MRI 2017), Nov 2017, Berlin, Germany
An accurate supervised segmentation of 3D individual lower leg muscles from 7T-MRI using label propagation
Augustin C. Ogier, Alexandre Fouré, Michaël Sdika, Arnaud Le Troter, David Bendahan
MYO-MRI, Imaging in Neuromuscular Disease, Nov 2017, Berlin, Germany
Segmentation d’images IRM à 7T des muscles individuels basée sur des approches de propagation de masques
Augustin C. Ogier, Alexandre Fouré, Michaël Sdika, Arnaud Le Troter, David Bendahan
15es Journées de la Société Française de Myologie (JSFM), Nov 2017, Colmar, France
- Conference papers
Individual muscle segmentation in MR images: A 3D propagation through 2D non-linear registration approaches
Augustin C. Ogier, Michael Sdika, Alexandre Fouré, Arnaud Le Troter, David Bendahan
39th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), IEEE, 2017, 2017, pp.317--320
DOI: 10.1109/EMBC.2017.8036826
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The Road Toward Reproducibility of Parametric Mapping of the Heart: A Technical Review
Augustin C. Ogier, Aurelien Bustin, Hubert Cochet, Juerg Schwitter, Ruud van Heeswijk
Frontiers in Cardiovascular Medicine, Frontiers Media, 2022, 9
Characterization of surface motion patterns in highly deformable soft tissue organs from dynamic MRI: An application to assess 4D bladder motion
Karim Makki, Amine Bohi, Augustin C. Ogier, Marc Emmanuel Bellemare
Computer Methods and Programs in Biomedicine, Elsevier, 2022, 218, pp.106708
DOI: 10.1016/j.cmpb.2022.106708
Whole-muscle fat analysis identifies distal muscle end as disease initiation site in facioscapulohumeral muscular dystrophy
Linda Heskamp, Augustin C. Ogier, Bendahan David, Arend Heerschap
Communications Medicine, Nature, 2022, 2, pp.155
DOI: 10.1038/s43856-022-00217-1
Three-dimensional reconstruction and characterization of bladder deformations
Augustin C. Ogier, Stanislas Rapacchi, Marc‐Emmanuel Bellemare
International Society for Magnetic Resonance in Medicine (ISMRM), May 2022, London, United Kingdom
Geometric and clinical evaluation of deep learning-based segmentation of individual lower limb muscles from patients with neuropathies
Marc-Adrien Hostin, Augustin C. Ogier, Constance P. Michel, Yann Le Fur, Maxime Guye, Shahram Attarian, Marc-Emmanuel Bellemare, David Bendahan
International Society for Magnetic Resonance in Medicine (ISMRM), May 2022, London, United Kingdom
- Journal articles
Overview of MR Image Segmentation Strategies in Neuromuscular Disorders
Augustin C. Ogier, Marc-Adrien Hostin, Marc-Emmanuel Bellemare, David Bendahan
Frontiers in Neurology, Frontiers Media, 2021, 12, pp.625308
DOI: 10.3389/fneur.2021.625308
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Impaired aerobic capacity and premature fatigue preceding muscle weakness in the skeletal muscle Tfam KO mouse model
Benjamin Chatel, Sylvie Ducreux, Zeina Harhous, Nadia Bendridi, I. Varlet, Augustin C. Ogier, Monique Bernard, Julien Gondin, Jennifer Rieusset, Håkan Westerblad, David Bendahan, Charlotte Gineste
Disease Models & Mechanisms, Cambridge Company of Biologists, 2021, 14
DOI: 10.1242/dmm.048981
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Assessment of in vivo bone microarchitecture changes in an anti-TNFα treated psoriatic arthritic patient
Enrico Soldati, Lucas Escoffier, Sophie Gabriel, Augustin C. Ogier, Christophe Chagnaud, Jean Mattei, Serge Cammilleri, David Bendahan, Sandrine Guis
PLoS ONE, Public Library of Science, 2021, 16, pp.e0251788
DOI: 10.1371/journal.pone.0251788
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- Conference communications
Fonction de perte basée sur les contours pour la segmentation d’IRM de vessie par apprentissage profond
Marc-Adrien Hostin, Augustin C. Ogier, Marc-Emmanuel Bellemare
5ème congrès scientifique de la Société Francaise de Résonance Magnétique en Biologie et Médecine (SFRMBM), Sep 2021, Lyon, France
Reconstruction et caractérisation 3D des déformations de la vessie
Augustin C. Ogier, Stanislas Rapacchi, Marc-Emmanuel Bellemare
5ème Congrès de la Société Française de Résonance Magnétique en Biologie et Médecine (SFRMBM), Sep 2021, Lyon, France
- Conference papers
Combining loss functions for deep learning bladder segmentation on dynamic MRI
Marc-Adrien Hostin, Augustin C. Ogier, Nicolas Pirró, Marc-Emmanuel Bellemare
IEEE EMBS International Conference on Biomedical and Health Informatics (BHI), 2021, pp.1-4
DOI: 10.1109/BHI50953.2021.9508559
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A new geodesic-based feature for characterization of 3D shapes: application to soft tissue organ temporal deformations
Karim Makki, Amine Bohi, Augustin C. Ogier, Marc-Emmanuel Bellemare
25th International Conference on Pattern Recognition : ICPR2020, 2021
DOI: 10.1109/ICPR48806.2021.9412922
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2020- Journal articles
Supervised segmentation framework for evaluation of diffusion tensor imaging indices in skeletal muscle
Laura Secondulfo, Augustin C. Ogier, Jithsa Monte, Vincent Aengevaeren, David Bendahan, Aart Nederveen, Gustav Strijkers, Melissa Hooijmans
NMR in Biomedicine, Wiley, 2020
DOI: 10.1002/nbm.4406
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Deep learning‐based fully automatic segmentation of wrist cartilage in MR images
Ekaterina Brui, Aleksandr Efimtcev, Vladimir Fokin, Remi Fernandez, Anatoliy Levchuk, Augustin C. Ogier, Alexey Samsonov, Jean Mattei, Irina Melchakova, David Bendahan, Anna Andreychenko
NMR in Biomedicine, Wiley, 2020, 33
DOI: 10.1002/nbm.4320
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A Quantitative muscle MRI Study of Patients with Sporadic Inclusion Body Myositis
Behnaz Ansari, Emmanuelle Salort-Campana, Augustin C. Ogier, Arnaud Le Troter, Benjamin de Sainte Marie, Maxime Guye, Emilien Delmont, Aude-Marie Grapperon, Annie Verschueren, Bendahan David, Shahram Attarian
Muscle & nerve. Supplement., 2020, 61, pp.496-503
DOI: 10.1002/mus.26813
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Quantitative assessment of sciatic nerve changes in CMT1A patients using magnetic resonance neurography
Etienne Fortanier, Augustin C. Ogier, Emilien Delmont, Marie‐noëlle Lefebvre, Patrick Viout, Maxime Guye, David Bendahan, Shahram Attarian
European Journal of Neurology, Wiley, 2020, 27, pp.1382-1389
DOI: 10.1111/ene.14303
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Fat fraction distribution in lower limb muscles of patients with CMT1A
Joachim Bas, Augustin C. Ogier, Arnaud Le Troter, Emilien Delmont, Benjamin Leporq, Lauriane Pini, Maxime Guye, Amandine Parlanti, Marie-Noëlle Lefebvre, David Bendahan, Shahram Attarian
Neurology, American Academy of Neurology, 2020, 94, pp.e1480-e1487
DOI: 10.1212/WNL.0000000000009013
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- Conference communications
Muscular fat infiltration in FSHD starts with a “fat burst” near the distal tendon and advances towards the proximal tendon
Linda Heskamp, Augustin C. Ogier, David Bendahan, Arend Heerschap
International Society for Magnetic Resonance in Medicine (ISMRM), Aug 2020, Online, United States
Muscular fat infiltration in FSHD starts with a ‘‘fat burst’’ near the distal tendon and advances towards the proximal tendon
Linda Heskamp, Augustin C. Ogier, David Bendahan, Arend Heerschap
The 37th Annual Scientific Meeting of European Society for Magnetic Resonance in Medicine and Biology (ESMRMB), Sep 2020, Online, Austria
2019- Journal articles
Muscle alterations induced by electrostimulation are lower at short quadriceps femoris length
Alexandre Fouré, Augustin C. Ogier, Maxime Guye, Julien Gondin, David Bendahan
European Journal of Applied Physiology, Springer Verlag, 2019, 120, pp.325 - 335
DOI: 10.1007/s00421-019-04277-5
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A novel segmentation framework dedicated to the follow‐up of fat infiltration in individual muscles of patients with neuromuscular disorders
Augustin C. Ogier, Linda Heskamp, Constance P. Michel, Alexandre Fouré, Marc-Emmanuel Bellemare, Arnaud Troter, Arend Heerschap, David Bendahan
Magnetic Resonance in Medicine, Wiley, 2019, 83, pp.pp.1825-1836
DOI: 10.1002/mrm.28030
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Spatial difference can occur between activated and damaged muscle areas following electrically‐induced isometric contractions
Alexandre Fouré, Arnaud Le Troter, Augustin C. Ogier, Maxime Guye, Julien Gondin, David Bendahan
The Journal of Physiology, Wiley, 2019, 597, pp.4227-4236
DOI: 10.1113/JP278205
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Ultrahigh-Field Multimodal MRI Assessment of Muscle Damage
Alexandre Fouré, Lauriane Pini, Stanislas Rappacchi, Augustin C. Ogier, Jean-Camille Mattei, Mark Bydder, Maxime Guye, David Bendahan
Journal of Magnetic Resonance Imaging, Wiley-Blackwell, 2019, 49, pp.904-906
DOI: 10.1002/jmri.26222
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In vivo characterization of skeletal muscle function in nebulin‐deficient mice
Charlotte Gineste, Augustin C. Ogier, Isabelle Varlet, Zaynab Hourani, Monique Bernard, Henk Granzier, David Bendahan, Julien Gondin
Muscle & Nerve, Wiley, 2019, 61, pp.416 - 424
DOI: 10.1002/mus.26798
Copy BibTeX entry
- Patents
METHOD AND DEVICE FOR SEGMENTING IMAGES BY AUTOMATIC PROPAGATION INTO AN (N+1)-TH DIMENSION OF AN IMAGE SEGMENTATION INITIALIZED IN DIMENSION N
Arnaud Le Troter, David Bendahan, Augustin C. Ogier
Patent n°WO/2019/012220, 2019, France
- Conference communications
Suivi dynamique 3D des organes pelviens - résultats préliminaires
Augustin C. Ogier, Stanislas Rapacchi, Arnaud Le Troter, Marc-Emmanuel Bellemare
GRETSI, Aug 2019, Lille, France
Neurographie IRM quantitative de patients atteints d’une neuropathie de Charcot-Marie-Tooth de type 1A
Etienne Fortanier, Augustin C. Ogier, Marie-Noëlle Lefebvre, Émilien Delmont, David Bendahan, Shahram Attarian
17es Journées de la Société Française de Myologie (JSFM), Nov 2019, Marseille, France
Intramuscular Pattern of Fat Infiltration Measured by MRI to Identify Disease Initiation in FSHD
Linda Heskamp, Augustin C. Ogier, Arnaud Le Troter, David Bendahan, Arend Heerschap
MYO-MRI, Imaging in Neuromuscular Disease, Nov 2019, Berlin, Germany
Areas of muscle tissue alteration can differ from activated regions during electrically-induced isometric contractions
Alexandre Fouré, Arnaud Le Troter, Augustin C. Ogier, Maxime Guye, Julien Gondin, David Bendahan
MYO-MRI, Imaging in Neuromuscular Disease, Nov 2019, Montréal, Canada
Intramuscular pattern of fat infiltration measured by MRI to identify disease initiation in FSHD
Linda Heskamp, Augustin C. Ogier, Arnaud Le Troter, David Bendahan, Arend Heerschap
FSH Society International Research Congress, Jun 2019, Marseille, France
Fat fraction distribution in lower limb muscles of CMT1A patients: a quantitative MRI study
Joachim Bas, Augustin C. Ogier, Arnaud Le Troter, Émilien Delmont, Benjamin Leporq, Lauriane Pini, Maxime Guye, Amandine Parlanti, Marie-Noëlle Lefebvre, David Bendahan, Shahram Attarian
MYO-MRI, Imaging in Neuromuscular Disease, Nov 2019, Berlin, Germany
A single session of neuromuscular electrically evoked isometric contractions generates superficial activation of knee extensor muscles and localized alterations
Alexandre Fouré, Arnaud Le Troter, Augustin C. Ogier, Maxime Guye, Julien Gondin, Bendahan David
24th annual Congress of the European College of Sport Science (ECSS), Jul 2019, Prague, Czech Republic
- Conference papers
3D Dynamic MRI for Pelvis Observation - a First Step
Augustin C. Ogier, Stanislas Rapacchi, Arnaud Le Troter, Marc-Emmanuel Bellemare
IEEE 16th International Symposium on Biomedical Imaging (ISBI), 2019, pp.1801-1804
DOI: 10.1109/ISBI.2019.8759589
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2018- Journal articles
L-tyrosine supplementation does not ameliorate skeletal muscle dysfunction in zebrafish and mouse models of dominant skeletal muscle α-actin nemaline myopathy
Adriana Messineo, Charlotte Gineste, Tamar Sztal, Elyshia Mcnamara, Christophe A Vilmen, Augustin C. Ogier, Dorothee Hahne, David Bendahan, Nigel G. Laing, Robert Bryson-Richardson, Julien Gondin, Kristen J. Nowak
Scientific Reports, Nature Publishing Group, 2018, 8, pp.11490
DOI: 10.1038/s41598-018-29437-z
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Diffusion Properties and 3D Architecture of Human Lower Leg Muscles Assessed with Ultra-High-Field-Strength Diffusion-Tensor MR Imaging and Tractography: Reproducibility and Sensitivity to Sex Difference and Intramuscular Variability
Alexandre Fouré, Augustin C. Ogier, Arnaud Le Troter, Christophe Vilmen, Thorsten Feiweier, Maxime Guye, Julien Gondin, Pierre Besson, David Bendahan
Radiology, Radiological Society of North America, 2018, 287, pp.592-607
DOI: 10.1148/radiol.2017171330
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- Conference communications
Semi-automatic segmentation of individual muscles in MR images: A new tool dedicated to the follow-up of patients with neuromuscular disorders
Augustin C. Ogier, Linda Heskamp, Alexandre Fouré, Marc-Emmanuel Bellemare, Arnaud Le Troter, Arend Heerschap, David Bendahan
International Society for Magnetic Resonance in Medicine (ISMRM), Jun 2018, Paris, France
Intramuscular variability and sex difference in diffusion properties and 3D architecture of human lower leg muscles assessed with ultra-high-field diffusion tensor imaging and tractography
Alexandre Fouré, Augustin C. Ogier, Arnaud Le Troter, Christophe A Vilmen, Thorsten Feiweier, Maxime Guye, Julien Gondin, Pierre Besson, David Bendahan
International Society for Magnetic Resonance in Medicine (ISMRM), Jun 2018, Paris, France
Méthode de segmentation dédiée au suivi de l'infiltration en graisse des muscles individuels des patients atteints de maladies neuromusculaires
Augustin C. Ogier, Linda Heskamp, Alexandre Fouré, Arnaud Le Troter, Arend Heerschap, David Bendahan
16es Journées de la Société Française de Myologie (JSFM), Nov 2018, Brest, France
2017- Conference communications
3D MRI Segmentation of muscle through 2D multi-label propagation at 7T
Augustin C. Ogier, Alexandre Fouré, Michaël Sdika, Arnaud Le Troter, Bendahan David
34th Annual Scientific Meeting of the European Society of Magnetic Resonance in Medicine and Biology, Oct 2017, Barcelone, Spain
Caractérisation de la microarchitecture des muscles de la jambe par IRM à très haut champs magnétique (7T) : Etude de faisabilité et perspectives pour une évaluation précise et non invasive de l’architecture musculaire en 3D
Alexandre Fouré, Pierre Besson, Arnaud Le Troter, Augustin C. Ogier, Thorsten Feiweier, Christophe A Vilmen, Julien Gondin, Maxime Guye, David Bendahan
3ème Congrès de la Société Française de Résonance Magnétique en Biologie et Médecine (SFRMBM), Mar 2017, Bordeaux, France
3D architecture of human lower leg muscles assessed with ultra-high-field diffusion tensor imaging and tractography: sensitivity to sex difference and intramuscular variability
Alexandre Fouré, Augustin C. Ogier, Arnaud Le Troter, Thorsten Feiweier, Christophe A Vilmen, Maxime Guye, Julien Gondin, Pierre Besson, David Bendahan
MYO-MRI, Imaging in Neuromuscular Disease, Nov 2017, Berlin, Germany
Caractérisation de la microarchitecture des muscles de la jambe par IRM à très haut champ (7T) : Etude de faisabilité pour une évaluation précise et non-invasive de l’architecture musculaire en 3D
Alexandre Fouré, Pierre Besson, Arnaud Le Troter, Augustin C. Ogier, Thorsten Feiweier, Christophe Vilmen, Maxime Guye, Julien Gondin, Bendahan David
3e congrès de la Société Française de Résonance Magnétique Biologique et Médicale, Mar 2017, Bordeaux, France
Segmentation des muscles individuels en IRM basée sur des approches de recalage non-linéaire
Augustin C. Ogier, Michaël Sdika, Alexandre Fouré, Arnaud Le Troter, David Bendahan
3ème Congrès de la Société Française de Résonance Magnétique en Biologie et Médecine (SFRMBM), Mar 2017, Bordeaux, France
3D Architecture of Human Lower Leg Muscles assessed with Ultra High-Field Diffusion Tensor Imaging and Tractography: Sensitivity to Sex-Difference and Intramuscular Variability
Alexandre Fouré, Augustin C. Ogier, Arnaud Le Troter, Thorsten Feiweier, Christophe Vilmen, Maxime Guye, Julien Gondin, Pierre Besson, Bendahan David
Imaging in Neuromuscular Disease (Myo-MRI 2017), Nov 2017, Berlin, Germany
An accurate supervised segmentation of 3D individual lower leg muscles from 7T-MRI using label propagation
Augustin C. Ogier, Alexandre Fouré, Michaël Sdika, Arnaud Le Troter, David Bendahan
MYO-MRI, Imaging in Neuromuscular Disease, Nov 2017, Berlin, Germany
Segmentation d’images IRM à 7T des muscles individuels basée sur des approches de propagation de masques
Augustin C. Ogier, Alexandre Fouré, Michaël Sdika, Arnaud Le Troter, David Bendahan
15es Journées de la Société Française de Myologie (JSFM), Nov 2017, Colmar, France
- Conference papers
Individual muscle segmentation in MR images: A 3D propagation through 2D non-linear registration approaches
Augustin C. Ogier, Michael Sdika, Alexandre Fouré, Arnaud Le Troter, David Bendahan
39th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), IEEE, 2017, 2017, pp.317--320
DOI: 10.1109/EMBC.2017.8036826
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Supervised segmentation framework for evaluation of diffusion tensor imaging indices in skeletal muscle
Laura Secondulfo, Augustin C. Ogier, Jithsa Monte, Vincent Aengevaeren, David Bendahan, Aart Nederveen, Gustav Strijkers, Melissa Hooijmans
NMR in Biomedicine, Wiley, 2020
DOI: 10.1002/nbm.4406
Deep learning‐based fully automatic segmentation of wrist cartilage in MR images
Ekaterina Brui, Aleksandr Efimtcev, Vladimir Fokin, Remi Fernandez, Anatoliy Levchuk, Augustin C. Ogier, Alexey Samsonov, Jean Mattei, Irina Melchakova, David Bendahan, Anna Andreychenko
NMR in Biomedicine, Wiley, 2020, 33
DOI: 10.1002/nbm.4320
A Quantitative muscle MRI Study of Patients with Sporadic Inclusion Body Myositis
Behnaz Ansari, Emmanuelle Salort-Campana, Augustin C. Ogier, Arnaud Le Troter, Benjamin de Sainte Marie, Maxime Guye, Emilien Delmont, Aude-Marie Grapperon, Annie Verschueren, Bendahan David, Shahram Attarian
Muscle & nerve. Supplement., 2020, 61, pp.496-503
DOI: 10.1002/mus.26813
Quantitative assessment of sciatic nerve changes in CMT1A patients using magnetic resonance neurography
Etienne Fortanier, Augustin C. Ogier, Emilien Delmont, Marie‐noëlle Lefebvre, Patrick Viout, Maxime Guye, David Bendahan, Shahram Attarian
European Journal of Neurology, Wiley, 2020, 27, pp.1382-1389
DOI: 10.1111/ene.14303
Fat fraction distribution in lower limb muscles of patients with CMT1A
Joachim Bas, Augustin C. Ogier, Arnaud Le Troter, Emilien Delmont, Benjamin Leporq, Lauriane Pini, Maxime Guye, Amandine Parlanti, Marie-Noëlle Lefebvre, David Bendahan, Shahram Attarian
Neurology, American Academy of Neurology, 2020, 94, pp.e1480-e1487
DOI: 10.1212/WNL.0000000000009013
Muscular fat infiltration in FSHD starts with a “fat burst” near the distal tendon and advances towards the proximal tendon
Linda Heskamp, Augustin C. Ogier, David Bendahan, Arend Heerschap
International Society for Magnetic Resonance in Medicine (ISMRM), Aug 2020, Online, United States
Muscular fat infiltration in FSHD starts with a ‘‘fat burst’’ near the distal tendon and advances towards the proximal tendon
Linda Heskamp, Augustin C. Ogier, David Bendahan, Arend Heerschap
The 37th Annual Scientific Meeting of European Society for Magnetic Resonance in Medicine and Biology (ESMRMB), Sep 2020, Online, Austria
- Journal articles
Muscle alterations induced by electrostimulation are lower at short quadriceps femoris length
Alexandre Fouré, Augustin C. Ogier, Maxime Guye, Julien Gondin, David Bendahan
European Journal of Applied Physiology, Springer Verlag, 2019, 120, pp.325 - 335
DOI: 10.1007/s00421-019-04277-5
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A novel segmentation framework dedicated to the follow‐up of fat infiltration in individual muscles of patients with neuromuscular disorders
Augustin C. Ogier, Linda Heskamp, Constance P. Michel, Alexandre Fouré, Marc-Emmanuel Bellemare, Arnaud Troter, Arend Heerschap, David Bendahan
Magnetic Resonance in Medicine, Wiley, 2019, 83, pp.pp.1825-1836
DOI: 10.1002/mrm.28030
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Spatial difference can occur between activated and damaged muscle areas following electrically‐induced isometric contractions
Alexandre Fouré, Arnaud Le Troter, Augustin C. Ogier, Maxime Guye, Julien Gondin, David Bendahan
The Journal of Physiology, Wiley, 2019, 597, pp.4227-4236
DOI: 10.1113/JP278205
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Ultrahigh-Field Multimodal MRI Assessment of Muscle Damage
Alexandre Fouré, Lauriane Pini, Stanislas Rappacchi, Augustin C. Ogier, Jean-Camille Mattei, Mark Bydder, Maxime Guye, David Bendahan
Journal of Magnetic Resonance Imaging, Wiley-Blackwell, 2019, 49, pp.904-906
DOI: 10.1002/jmri.26222
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In vivo characterization of skeletal muscle function in nebulin‐deficient mice
Charlotte Gineste, Augustin C. Ogier, Isabelle Varlet, Zaynab Hourani, Monique Bernard, Henk Granzier, David Bendahan, Julien Gondin
Muscle & Nerve, Wiley, 2019, 61, pp.416 - 424
DOI: 10.1002/mus.26798
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- Patents
METHOD AND DEVICE FOR SEGMENTING IMAGES BY AUTOMATIC PROPAGATION INTO AN (N+1)-TH DIMENSION OF AN IMAGE SEGMENTATION INITIALIZED IN DIMENSION N
Arnaud Le Troter, David Bendahan, Augustin C. Ogier
Patent n°WO/2019/012220, 2019, France
- Conference communications
Suivi dynamique 3D des organes pelviens - résultats préliminaires
Augustin C. Ogier, Stanislas Rapacchi, Arnaud Le Troter, Marc-Emmanuel Bellemare
GRETSI, Aug 2019, Lille, France
Neurographie IRM quantitative de patients atteints d’une neuropathie de Charcot-Marie-Tooth de type 1A
Etienne Fortanier, Augustin C. Ogier, Marie-Noëlle Lefebvre, Émilien Delmont, David Bendahan, Shahram Attarian
17es Journées de la Société Française de Myologie (JSFM), Nov 2019, Marseille, France
Intramuscular Pattern of Fat Infiltration Measured by MRI to Identify Disease Initiation in FSHD
Linda Heskamp, Augustin C. Ogier, Arnaud Le Troter, David Bendahan, Arend Heerschap
MYO-MRI, Imaging in Neuromuscular Disease, Nov 2019, Berlin, Germany
Areas of muscle tissue alteration can differ from activated regions during electrically-induced isometric contractions
Alexandre Fouré, Arnaud Le Troter, Augustin C. Ogier, Maxime Guye, Julien Gondin, David Bendahan
MYO-MRI, Imaging in Neuromuscular Disease, Nov 2019, Montréal, Canada
Intramuscular pattern of fat infiltration measured by MRI to identify disease initiation in FSHD
Linda Heskamp, Augustin C. Ogier, Arnaud Le Troter, David Bendahan, Arend Heerschap
FSH Society International Research Congress, Jun 2019, Marseille, France
Fat fraction distribution in lower limb muscles of CMT1A patients: a quantitative MRI study
Joachim Bas, Augustin C. Ogier, Arnaud Le Troter, Émilien Delmont, Benjamin Leporq, Lauriane Pini, Maxime Guye, Amandine Parlanti, Marie-Noëlle Lefebvre, David Bendahan, Shahram Attarian
MYO-MRI, Imaging in Neuromuscular Disease, Nov 2019, Berlin, Germany
A single session of neuromuscular electrically evoked isometric contractions generates superficial activation of knee extensor muscles and localized alterations
Alexandre Fouré, Arnaud Le Troter, Augustin C. Ogier, Maxime Guye, Julien Gondin, Bendahan David
24th annual Congress of the European College of Sport Science (ECSS), Jul 2019, Prague, Czech Republic
- Conference papers
3D Dynamic MRI for Pelvis Observation - a First Step
Augustin C. Ogier, Stanislas Rapacchi, Arnaud Le Troter, Marc-Emmanuel Bellemare
IEEE 16th International Symposium on Biomedical Imaging (ISBI), 2019, pp.1801-1804
DOI: 10.1109/ISBI.2019.8759589
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2018- Journal articles
L-tyrosine supplementation does not ameliorate skeletal muscle dysfunction in zebrafish and mouse models of dominant skeletal muscle α-actin nemaline myopathy
Adriana Messineo, Charlotte Gineste, Tamar Sztal, Elyshia Mcnamara, Christophe A Vilmen, Augustin C. Ogier, Dorothee Hahne, David Bendahan, Nigel G. Laing, Robert Bryson-Richardson, Julien Gondin, Kristen J. Nowak
Scientific Reports, Nature Publishing Group, 2018, 8, pp.11490
DOI: 10.1038/s41598-018-29437-z
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Diffusion Properties and 3D Architecture of Human Lower Leg Muscles Assessed with Ultra-High-Field-Strength Diffusion-Tensor MR Imaging and Tractography: Reproducibility and Sensitivity to Sex Difference and Intramuscular Variability
Alexandre Fouré, Augustin C. Ogier, Arnaud Le Troter, Christophe Vilmen, Thorsten Feiweier, Maxime Guye, Julien Gondin, Pierre Besson, David Bendahan
Radiology, Radiological Society of North America, 2018, 287, pp.592-607
DOI: 10.1148/radiol.2017171330
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- Conference communications
Semi-automatic segmentation of individual muscles in MR images: A new tool dedicated to the follow-up of patients with neuromuscular disorders
Augustin C. Ogier, Linda Heskamp, Alexandre Fouré, Marc-Emmanuel Bellemare, Arnaud Le Troter, Arend Heerschap, David Bendahan
International Society for Magnetic Resonance in Medicine (ISMRM), Jun 2018, Paris, France
Intramuscular variability and sex difference in diffusion properties and 3D architecture of human lower leg muscles assessed with ultra-high-field diffusion tensor imaging and tractography
Alexandre Fouré, Augustin C. Ogier, Arnaud Le Troter, Christophe A Vilmen, Thorsten Feiweier, Maxime Guye, Julien Gondin, Pierre Besson, David Bendahan
International Society for Magnetic Resonance in Medicine (ISMRM), Jun 2018, Paris, France
Méthode de segmentation dédiée au suivi de l'infiltration en graisse des muscles individuels des patients atteints de maladies neuromusculaires
Augustin C. Ogier, Linda Heskamp, Alexandre Fouré, Arnaud Le Troter, Arend Heerschap, David Bendahan
16es Journées de la Société Française de Myologie (JSFM), Nov 2018, Brest, France
2017- Conference communications
3D MRI Segmentation of muscle through 2D multi-label propagation at 7T
Augustin C. Ogier, Alexandre Fouré, Michaël Sdika, Arnaud Le Troter, Bendahan David
34th Annual Scientific Meeting of the European Society of Magnetic Resonance in Medicine and Biology, Oct 2017, Barcelone, Spain
Caractérisation de la microarchitecture des muscles de la jambe par IRM à très haut champs magnétique (7T) : Etude de faisabilité et perspectives pour une évaluation précise et non invasive de l’architecture musculaire en 3D
Alexandre Fouré, Pierre Besson, Arnaud Le Troter, Augustin C. Ogier, Thorsten Feiweier, Christophe A Vilmen, Julien Gondin, Maxime Guye, David Bendahan
3ème Congrès de la Société Française de Résonance Magnétique en Biologie et Médecine (SFRMBM), Mar 2017, Bordeaux, France
3D architecture of human lower leg muscles assessed with ultra-high-field diffusion tensor imaging and tractography: sensitivity to sex difference and intramuscular variability
Alexandre Fouré, Augustin C. Ogier, Arnaud Le Troter, Thorsten Feiweier, Christophe A Vilmen, Maxime Guye, Julien Gondin, Pierre Besson, David Bendahan
MYO-MRI, Imaging in Neuromuscular Disease, Nov 2017, Berlin, Germany
Caractérisation de la microarchitecture des muscles de la jambe par IRM à très haut champ (7T) : Etude de faisabilité pour une évaluation précise et non-invasive de l’architecture musculaire en 3D
Alexandre Fouré, Pierre Besson, Arnaud Le Troter, Augustin C. Ogier, Thorsten Feiweier, Christophe Vilmen, Maxime Guye, Julien Gondin, Bendahan David
3e congrès de la Société Française de Résonance Magnétique Biologique et Médicale, Mar 2017, Bordeaux, France
Segmentation des muscles individuels en IRM basée sur des approches de recalage non-linéaire
Augustin C. Ogier, Michaël Sdika, Alexandre Fouré, Arnaud Le Troter, David Bendahan
3ème Congrès de la Société Française de Résonance Magnétique en Biologie et Médecine (SFRMBM), Mar 2017, Bordeaux, France
3D Architecture of Human Lower Leg Muscles assessed with Ultra High-Field Diffusion Tensor Imaging and Tractography: Sensitivity to Sex-Difference and Intramuscular Variability
Alexandre Fouré, Augustin C. Ogier, Arnaud Le Troter, Thorsten Feiweier, Christophe Vilmen, Maxime Guye, Julien Gondin, Pierre Besson, Bendahan David
Imaging in Neuromuscular Disease (Myo-MRI 2017), Nov 2017, Berlin, Germany
An accurate supervised segmentation of 3D individual lower leg muscles from 7T-MRI using label propagation
Augustin C. Ogier, Alexandre Fouré, Michaël Sdika, Arnaud Le Troter, David Bendahan
MYO-MRI, Imaging in Neuromuscular Disease, Nov 2017, Berlin, Germany
Segmentation d’images IRM à 7T des muscles individuels basée sur des approches de propagation de masques
Augustin C. Ogier, Alexandre Fouré, Michaël Sdika, Arnaud Le Troter, David Bendahan
15es Journées de la Société Française de Myologie (JSFM), Nov 2017, Colmar, France
- Conference papers
Individual muscle segmentation in MR images: A 3D propagation through 2D non-linear registration approaches
Augustin C. Ogier, Michael Sdika, Alexandre Fouré, Arnaud Le Troter, David Bendahan
39th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), IEEE, 2017, 2017, pp.317--320
DOI: 10.1109/EMBC.2017.8036826
Copy BibTeX entry
L-tyrosine supplementation does not ameliorate skeletal muscle dysfunction in zebrafish and mouse models of dominant skeletal muscle α-actin nemaline myopathy
Adriana Messineo, Charlotte Gineste, Tamar Sztal, Elyshia Mcnamara, Christophe A Vilmen, Augustin C. Ogier, Dorothee Hahne, David Bendahan, Nigel G. Laing, Robert Bryson-Richardson, Julien Gondin, Kristen J. Nowak
Scientific Reports, Nature Publishing Group, 2018, 8, pp.11490
DOI: 10.1038/s41598-018-29437-z
Diffusion Properties and 3D Architecture of Human Lower Leg Muscles Assessed with Ultra-High-Field-Strength Diffusion-Tensor MR Imaging and Tractography: Reproducibility and Sensitivity to Sex Difference and Intramuscular Variability
Alexandre Fouré, Augustin C. Ogier, Arnaud Le Troter, Christophe Vilmen, Thorsten Feiweier, Maxime Guye, Julien Gondin, Pierre Besson, David Bendahan
Radiology, Radiological Society of North America, 2018, 287, pp.592-607
DOI: 10.1148/radiol.2017171330
Semi-automatic segmentation of individual muscles in MR images: A new tool dedicated to the follow-up of patients with neuromuscular disorders
Augustin C. Ogier, Linda Heskamp, Alexandre Fouré, Marc-Emmanuel Bellemare, Arnaud Le Troter, Arend Heerschap, David Bendahan
International Society for Magnetic Resonance in Medicine (ISMRM), Jun 2018, Paris, France
Intramuscular variability and sex difference in diffusion properties and 3D architecture of human lower leg muscles assessed with ultra-high-field diffusion tensor imaging and tractography
Alexandre Fouré, Augustin C. Ogier, Arnaud Le Troter, Christophe A Vilmen, Thorsten Feiweier, Maxime Guye, Julien Gondin, Pierre Besson, David Bendahan
International Society for Magnetic Resonance in Medicine (ISMRM), Jun 2018, Paris, France
Méthode de segmentation dédiée au suivi de l'infiltration en graisse des muscles individuels des patients atteints de maladies neuromusculaires
Augustin C. Ogier, Linda Heskamp, Alexandre Fouré, Arnaud Le Troter, Arend Heerschap, David Bendahan
16es Journées de la Société Française de Myologie (JSFM), Nov 2018, Brest, France
- Conference communications
3D MRI Segmentation of muscle through 2D multi-label propagation at 7T
Augustin C. Ogier, Alexandre Fouré, Michaël Sdika, Arnaud Le Troter, Bendahan David
34th Annual Scientific Meeting of the European Society of Magnetic Resonance in Medicine and Biology, Oct 2017, Barcelone, Spain
Caractérisation de la microarchitecture des muscles de la jambe par IRM à très haut champs magnétique (7T) : Etude de faisabilité et perspectives pour une évaluation précise et non invasive de l’architecture musculaire en 3D
Alexandre Fouré, Pierre Besson, Arnaud Le Troter, Augustin C. Ogier, Thorsten Feiweier, Christophe A Vilmen, Julien Gondin, Maxime Guye, David Bendahan
3ème Congrès de la Société Française de Résonance Magnétique en Biologie et Médecine (SFRMBM), Mar 2017, Bordeaux, France
3D architecture of human lower leg muscles assessed with ultra-high-field diffusion tensor imaging and tractography: sensitivity to sex difference and intramuscular variability
Alexandre Fouré, Augustin C. Ogier, Arnaud Le Troter, Thorsten Feiweier, Christophe A Vilmen, Maxime Guye, Julien Gondin, Pierre Besson, David Bendahan
MYO-MRI, Imaging in Neuromuscular Disease, Nov 2017, Berlin, Germany
Caractérisation de la microarchitecture des muscles de la jambe par IRM à très haut champ (7T) : Etude de faisabilité pour une évaluation précise et non-invasive de l’architecture musculaire en 3D
Alexandre Fouré, Pierre Besson, Arnaud Le Troter, Augustin C. Ogier, Thorsten Feiweier, Christophe Vilmen, Maxime Guye, Julien Gondin, Bendahan David
3e congrès de la Société Française de Résonance Magnétique Biologique et Médicale, Mar 2017, Bordeaux, France
Segmentation des muscles individuels en IRM basée sur des approches de recalage non-linéaire
Augustin C. Ogier, Michaël Sdika, Alexandre Fouré, Arnaud Le Troter, David Bendahan
3ème Congrès de la Société Française de Résonance Magnétique en Biologie et Médecine (SFRMBM), Mar 2017, Bordeaux, France
3D Architecture of Human Lower Leg Muscles assessed with Ultra High-Field Diffusion Tensor Imaging and Tractography: Sensitivity to Sex-Difference and Intramuscular Variability
Alexandre Fouré, Augustin C. Ogier, Arnaud Le Troter, Thorsten Feiweier, Christophe Vilmen, Maxime Guye, Julien Gondin, Pierre Besson, Bendahan David
Imaging in Neuromuscular Disease (Myo-MRI 2017), Nov 2017, Berlin, Germany
An accurate supervised segmentation of 3D individual lower leg muscles from 7T-MRI using label propagation
Augustin C. Ogier, Alexandre Fouré, Michaël Sdika, Arnaud Le Troter, David Bendahan
MYO-MRI, Imaging in Neuromuscular Disease, Nov 2017, Berlin, Germany
Segmentation d’images IRM à 7T des muscles individuels basée sur des approches de propagation de masques
Augustin C. Ogier, Alexandre Fouré, Michaël Sdika, Arnaud Le Troter, David Bendahan
15es Journées de la Société Française de Myologie (JSFM), Nov 2017, Colmar, France
- Conference papers
Individual muscle segmentation in MR images: A 3D propagation through 2D non-linear registration approaches
Augustin C. Ogier, Michael Sdika, Alexandre Fouré, Arnaud Le Troter, David Bendahan
39th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), IEEE, 2017, 2017, pp.317--320
DOI: 10.1109/EMBC.2017.8036826
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